Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945777.1_cds_XP_016488158.1_78821
CDS Infomation

[gene=LOC107808175] [db_xref=GeneID:107808175] [protein=oxysterol-binding protein-related protein 3A-like] [protein_id=XP_016488158.1] [location=complement(join(12723..12963,15052..15230,16273..16417,17167..17343,18046..18167,18285..18403,18500..18572,18659..18775,19616..19709,21071..21186))] [gbkey=CDS]
Sequence

ATGGCGTCCAACAATGATGAGAAACAAAGCGGTAGCAGTGGTGGTGGCGGTTTCTTTTCC
TCAATAGCATCGAGCTTGTCCAATTTAGGCAGTGTTATGTCTAAATCTGTTAATGGCATG
CTTGGTTATGAAGGGCTGGAAGTCGTAAATCCCGAAGGAGGCAATGAAGATGCTGGTGCT
GAAGCCCAACGAGGAAGATGGAAGGCGGAGGATCGCGATAATTATTGGAAAATGATGCAG
AAGTACATAGGCGCTGATGTTACCTCGTTGGTGACATTGCCAGTTATTATTTGTGAGCCT
ATGACCAACCTTCAAAAAATGGCAGAGTTGATGGAGTATGCCCATCTACTGGACTTGGCA
GATGAGTGTGAGGACCCGCACATGAGATTAGTGTATTCTGCCTCATGGTTCATATCCGTG
TACTATGCCTTACAACGCACATGGAAGCCCTTCAACCCCATTCTGGGTGAAACTTATGAA
TTGGTTAACCACGCTGGAATCACATTTATTGCCGAGCAGGTTAGTCATCACCCCCCAATG
GGTGCAGCACATGCAGAAAATGAACATTTCATTTATGATATAACCTCGAAGGTGAAGACC
AAGTTCTTGGGAAATTCAGTTGAAGTTTATCCGCTTGGCAGGTCAAGGCTCACACTGAAA
AAGTCTGGTGTTGTCCTAGACTTGGTGCCTCCTCCAACAAAAGTTCACAATCTTATATTT
GGGAGAACTTGGATCGATTCACCTGGGGAGATGATCTTGACGAACCTGACGACAGGGGAT
AAAGTGTTATTGTATTTTCAACCTTGTGGCTGGTTTGGTGCTGGTCGCTATGAAGTTGAT
GGATATGTTTACAACAGTGAGGAAGAACCCAAAATTTTGATGACTGGAAAATGGAATGAA
TCTTTGAGTTATCAACCCTGTGATTTGGAAGGGGAACCCCTGCCAGGCAGCACAATGAAA
GAGGTCTGGAGAGCCGCTGATGCTCCTAAAAATGACAAATTTCAGTATACATATTTTGCA
CACAAGATTAACAGCTTTGATACTGCACCTAAGAAACTATTAGCATCTGATTCTCGCTTG
CGCCCTGATCGTTATGCACTTGAGAAAGGTGACTTATCCAAAGCTAGTTCAGAAAAGAGC
CGTTTGGAGGAAAGGCAGAGAGCTGACAGGAGAACAAGAGAGGCCAAGGGCGATGAATTC
AAACCAAAATGGTTCAACTTATCAAATGAAGTTTGCCCTACACCTTGGGGTGACTTGGAG
GTGTACGAGTACAATGGCAAATATCATGAACATCGTGCTGCTATTGATAGTTCTGATCAT
GCTGACGTTAAAACGACTGAGTTCAACCCCTGGCAATACGAAGATTCAGTAGCTTCTGCA
TAA

Peptide Sequence

PEP ID

XP_016488158.1
PEP Infomation

PREDICTED: oxysterol-binding protein-related protein 3A-like [Nicotiana tabacum]
Sequence

MASNNDEKQSGSSGGGGFFSSIASSLSNLGSVMSKSVNGMLGYEGLEVVNPEGGNEDAGA
EAQRGRWKAEDRDNYWKMMQKYIGADVTSLVTLPVIICEPMTNLQKMAELMEYAHLLDLA
DECEDPHMRLVYSASWFISVYYALQRTWKPFNPILGETYELVNHAGITFIAEQVSHHPPM
GAAHAENEHFIYDITSKVKTKFLGNSVEVYPLGRSRLTLKKSGVVLDLVPPPTKVHNLIF
GRTWIDSPGEMILTNLTTGDKVLLYFQPCGWFGAGRYEVDGYVYNSEEEPKILMTGKWNE
SLSYQPCDLEGEPLPGSTMKEVWRAADAPKNDKFQYTYFAHKINSFDTAPKKLLASDSRL
RPDRYALEKGDLSKASSEKSRLEERQRADRRTREAKGDEFKPKWFNLSNEVCPTPWGDLE
VYEYNGKYHEHRAAIDSSDHADVKTTEFNPWQYEDSVASA

Transcript Sequence

Gene sequence data has not been registered.